Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M12 Chr3p_UniqueNum	BreastC_M12 Chr3p_pVal	BreastC_M12 Chr3p_Unique	BreastC_M4 Ribosome_UniqueNum	BreastC_M4 Ribosome_pVal	BreastC_M4 Ribosome_Unique
GNF2_HDAC1	0		6.52526667527e-06	14	1.05213409294e-05	FAM111A|HNRNPA3|HNRNPDL|HNRNPM|HNRNPU|RBBP6|RBM39|SF1|SNRNP200|SRRM1|SRSF4|SS18L2|TARDBP|YTHDC1	7	2.52919242114e-06	EIF3D|EIF4B|FBL|RPL22|RPL34|RPS3|RPS7
GSE3982_MAC_VS_CENT_MEMORY_CD4_TCELL_DN	0		0.000692393559903	16	0.000598799694969	APBB3|ARHGAP33|CDK5RAP3|CROCCP2|MAU2|MIA2|MPPE1|MYH3|NSUN6|OFD1|PCNX2|PKD1P1|TNK2|TP73-AS1|TSPYL2|VPS13D	6	0.000785987424837	EEF1G|FAU|RPL35A|RPS6|RPS12|RPS17
GSE6269_HEALTHY_VS_FLU_INF_PBMC_UP	0		0.000463413298844	14	0.000926826597688	ABCD4|ANAPC5|BTAF1|KIAA0141|KLC1|KPNA6|MUM1|NSUN5P1|PLA2G6|SARM1|SRSF5|SUGP2|TMA7|ZBTB40	17	3.51786119463e-17	EEF1B2|EEF1G|EIF3D|EIF3F|EIF3K|EIF3L|FBL|RPL10A|RPL18A|RPL22|RPL24|RPL29|RPS10|RPS12|RPS14P3|RPS28|UBA52
GSE22886_NAIVE_CD4_TCELL_VS_12H_ACT_TH1_UP	0		9.46935988715e-06	24	4.72746692002e-08	ANKZF1|AP1G2|APBB3|ARHGAP33|ATXN7|CAPN3|CBX7|CCNL1|CEP164|CLK1|CLK4|ECHDC2|HOOK2|LTBP3|MGEA5|MYH3|MYO15B|PHC1|PLCH2|SF1|SUN1|VPS8|VPS13D|ZFC3H1	8	1.88914451051e-05	AP4S1|EEF2|EIF4B|NMUR1|RPL29|RPS9|RPS14P3|RPS29
GSE22886_NAIVE_CD4_TCELL_VS_48H_ACT_TH2_UP	0		0.000398011096219	16	0.000795847974951	CIRBP|CLASRP|CRY2|DBP|ECE1|LTBP3|MYH3|MYO15B|PARP6|RERE|SUN1|TNS2|TTC3|USP19|VILL|ZNF692	10	1.74217487228e-07	EEF2|EIF3D|FAU|MYC|RPL10A|RPL21|RPL29|RPS6|RPS9|RPS28
GSE24574_BCL6_HIGH_TFH_VS_TFH_CD4_TCELL_DN	0		0.000128575457251	17	0.00025714978581	AKAP8|AMT|CIRBP|CLSTN1|HNRNPDL|NXF1|PLCD1|PRDM2|RBM39|SEC31B|SETD1B|SFPQ|SGSM2|SNRNP70|SRSF6|SYNE2|TNK2	12	1.12869252233e-09	EIF3G|RPL22|RPL29|RPL34|RPL37|RPS12|RPS13|RPS15A|RPS16|RPS27A|RPS28|UBXN1
GSE24574_BCL6_HIGH_VS_LOW_TFH_CD4_TCELL_UP	0		0.000355635725156	16	0.00071125780469	AKAP8|AKAP17A|B3GALT4|CHKA|CIRBP|CLK1|CLSTN1|FHIT|ITIH4|PLCD1|PRDM2|RBM6|SETD1B|SGSM2|SRSF6|SYNE2	11	1.36456213678e-08	RPL11|RPL22|RPL29|RPL31|RPL34|RPL37|RPS12|RPS13|RPS14|RPS15A|UBXN1
GSE24634_NAIVE_CD4_TCELL_VS_DAY5_IL4_CONV_TREG_UP	0		0.000136419087048	17	0.00025714978581	AMT|ATXN7|CLK1|CLK4|ECHDC2|FHIT|PGGHG|PPP2R2D|RSRP1|SETD2|SMARCD3|SRSF5|TCTA|TP73-AS1|ZBTB40|ZNF589|ZSWIM8	8	1.56883882859e-05	RPL10L|RPL11|RPL28|RPL29|RPL34|RPL35A|RPS10|RPS14
GSE28726_ACT_CD4_TCELL_VS_ACT_NKTCELL_DN	0		0.000957272553781	16	0.000938725273491	AKAP17A|B3GALT4|CIRBP|CLK1|HNRNPDL|JADE2|NXF1|RBM39|SDR39U1|SEC31B|SGSM2|SNRNP70|SRSF5|SRSF6|TNK2|VPS8	6	0.000975819834072	RPL29|RPL31|RPS10|RPS27|RPS29|UBXN1
Human Bladder_Osman06_1054genes (16740760-TableS1)	0		9.90733816783e-06	48	1.9814676334e-05	APPL1|ARID1A|ARIH2|ARPC4-TTLL3|AVIL|C3ORF62|CBX6|CCDC84|CYB561D1|ENGASE|GBE1|GNB1|GRIPAP1|HERC2P9|HNRNPL|HNRNPM|IDS|INPP5A|KPNA6|MGEA5|NISCH|NOL9|OFD1|OGT|PHF1|PLA2G4B|PUM1|RBM4|RBM33|RERE|SCAP|SFI1|SIK3|SMARCC1|SMARCC2|SNRNP200|SRSF4|SRSF6|SS18L2|TMEM63A|TP73-AS1|TTC17|USP47|VAMP1|YLPM1|ZNF638|ZNF641|ZNF767P	28	1.65011024285e-15	FAU|FBL|LDLRAD3|RPL10A|RPL14|RPL15|RPL18A|RPL22|RPL24|RPL28|RPL29|RPL34|RPL35|RPL35A|RPL37|RPLP0|RPS3|RPS5|RPS6|RPS7|RPS10|RPS13|RPS16|RPS17|RPS25|RPS27|SNORD35A|UBA52
Human Lymphoma_VanLoo09_135genes (19797726-SuppTable1a)	0		7.66069538039e-05	14	6.97330045532e-05	BEND5|CIRBP|DDX17|EPB41|HNRNPA1|HNRNPM|HP1BP3|MAU2|OFD1|PIK3C2B|RBM6|REV1|SFPQ|YTHDC1	6	8.34809030547e-05	EEF2|EIF3L|EIF4B|FBL|RPL15|RPL37
JISON_SICKLE_CELL_DISEASE_DN	0		0.000283812068271	15	0.000567624136542	AP1G2|CIRBP|FNBP4|HNRNPDL|OGT|OTUD3|RBBP6|SAFB2|SETD2|SNRNP70|SNRNP200|SRSF5|SRSF6|SUGP2|ZNF354A	26	2.87154029425e-30	EEF1B2|EEF1G|EEF2|EIF3D|EIF3F|EIF3K|EIF4B|FBL|IMPDH2|RPL6|RPL9|RPL10A|RPL11|RPL14|RPL21|RPL22|RPL24|RPL37|RPLP0|RPLP1|RPS6|RPS7|RPS13|RPS27A|RPS28|SLC25A6
ONKEN_UVEAL_MELANOMA_DN	0		5.84185813065e-05	34	0.000116837162613	ABHD6|ACAA1|ANAPC5|APPL1|ARF4|ATXN7|CBX7|CCDC51|CIRBP|DAG1|DBP|GNB1|GOLGA4|GORASP1|HEMK1|HNRNPDL|HYAL2|LAMB2|LARS2|MGEA5|NCKIPSD|NDUFAF3|NEK4|PDHB|RHOA|SCAP|SETD2|SLC25A38|SMARCC1|TKT|UQCRC1|USP4|YLPM1|ZDHHC3	26	8.48654302301e-18	C6ORF48|CCNB1IP1|EIF3G|EIF3L|EIF4B|FBL|IMPDH2|RPL10A|RPL11|RPL14|RPL15|RPL18A|RPL22|RPL24|RPL28|RPL29|RPL31|RPL35A|RPS5|RPS9|RPS14P3|RPS27A|RPSA|RSL1D1|SEC11A|SLC25A6
OSMAN_BLADDER_CANCER_DN	0		4.98657750752e-08	34	9.97315501505e-08	ARID1A|ARIH2|AVIL|C3ORF62|CCDC84|CYB561D1|ENGASE|GRIPAP1|HNRNPM|IDS|MGEA5|NISCH|OFD1|OGT|PHF1|PUM1|RBM4|RBM33|RERE|SCAP|SELENOK|SFI1|SIK3|SMARCC1|SMARCC2|SNRNP200|SRSF4|SRSF6|SS18L2|TMEM63A|TP73-AS1|VAMP1|ZNF638|ZNF767P	31	7.92618486987e-28	EEF1B2|EEF1G|FAU|FBL|RPL9|RPL10A|RPL12|RPL14|RPL15|RPL18A|RPL22|RPL24|RPL28|RPL29|RPL34|RPL35|RPL35A|RPL37|RPLP0|RPS3|RPS5|RPS6|RPS7|RPS10|RPS13|RPS16|RPS17|RPS25|RPS27|RPSA|UBA52
RNA processing [GoID:GO:0006396; evidenceTypes:EXP|IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		3.48495944457e-08	60	6.96991888915e-08	ACIN1|AGO4|AKAP8L|AKAP17A|CCNL1|CDK11A|CELF6|CLASRP|CLK1|CLK4|CPSF7|DDX17|DHX30|ELP6|EXOSC7|EXOSC10|HNRNPA1|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|NOL9|NSUN5|NSUN5P1|NSUN5P2|NSUN6|PDE12|PPP4R2|PUM1|RBBP6|RBM4|RBM5|RBM6|RBM15B|RBM25|RBM39|RRP9|SAFB2|SF1|SFPQ|SFSWAP|SHQ1|SNRNP70|SNRNP200|SON|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|SUGP2|TARBP1|TARDBP|THOC7|USP4|YTHDC1|ZFC3H1|ZNF638|ZRSR2	47	1.44915034882e-34	FBL|METTL2B|RPL6|RPL9|RPL10A|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52
RNA-binding	0		0.000102710301609	58	6.15850047773e-13	ACIN1|AGO4|AKAP17A|CAPRIN2|CELF6|CIRBP|CPSF7|DDX6|DDX17|DHX30|EDC3|EIF4G3|EXOSC7|EXOSC10|HNRNPA1|HNRNPA3|HNRNPDL|HNRNPL|HNRNPM|HNRNPU|METTL3|NANOS3|NOL9|NSUN5|NSUN5P1|NSUN5P2|NSUN6|NXF1|PUM1|RBM4|RBM5|RBM6|RBM15B|RBM19|RBM25|RBM33|RBM39|RRP9|SAFB2|SCAF4|SETD1B|SF1|SFPQ|SFSWAP|SNRNP70|SON|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|TARBP1|TARDBP|THOC7|TNRC6A|YTHDC1|ZNF638|ZRSR2	12	0.000205420602603	EIF3D|EIF3G|EIF4B|FBL|IMPDH2|RPL11|RPL12|RPL22|RPL35A|RPL37|RPS3|RPS9
mRNA metabolic process [GoID:GO:0016071; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		1.49434617807e-08	55	2.98869235613e-08	ACIN1|AGO4|AKAP8L|AKAP17A|CDK11A|CELF6|CIRBP|CLASRP|CNOT10|CPSF7|DCP1A|DDX6|DDX17|EDC3|EXOSC7|EXOSC10|HNRNPA1|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|NANOS3|PDE12|PPP4R2|PRKCD|PSMD6|PUM1|RBBP6|RBM4|RBM5|RBM15B|RBM25|RBM39|SAFB2|SF1|SFPQ|SFSWAP|SMG6|SNRNP70|SNRNP200|SON|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|SUGP2|TARDBP|THOC7|TNKS1BP1|USP4|YTHDC1|ZHX2|ZRSR2	45	5.62969551436e-35	EIF4B|RPL6|RPL9|RPL10A|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|UBA52
ribonucleoprotein complex assembly [GoID:GO:0022618; evidenceTypes:IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000128574893061	17	0.00025714978581	AGO4|CIRBP|DDX6|DHX30|DYNC1H1|EDC3|LIMD1|RBM5|SF1|SFSWAP|SHQ1|SNRNP200|SRSF5|SRSF6|USP4|YTHDC1|ZRSR2	15	3.1186717169e-13	EIF3D|EIF4B|RPL6|RPL10L|RPL11|RPL12|RPL24|RPS5|RPS10|RPS14|RPS17|RPS19|RPS27|RPS28|RPSA
ribonucleoprotein complex biogenesis [GoID:GO:0022613; evidenceTypes:EXP|IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000146207599997	29	0.000292415199994	AGO4|CIRBP|DDX6|DDX17|DHX30|DYNC1H1|EDC3|EXOSC7|EXOSC10|LIMD1|MTG1|NOL9|NSUN5|NSUN5P1|NSUN5P2|RBM5|RRP9|SETD4|SF1|SFSWAP|SHQ1|SNRNP200|SRSF5|SRSF6|TARBP1|TSC1|USP4|YTHDC1|ZRSR2	49	4.48306791785e-52	EIF3D|EIF4B|FBL|RPL6|RPL9|RPL10A|RPL10L|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52
ribonucleoprotein complex subunit organization [GoID:GO:0071826; evidenceTypes:IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		8.93385240547e-05	18	0.000178677047352	AGO4|CIRBP|DDX6|DHX30|DYNC1H1|EDC3|KLC1|LIMD1|RBM5|SF1|SFSWAP|SHQ1|SNRNP200|SRSF5|SRSF6|USP4|YTHDC1|ZRSR2	15	7.57437462858e-13	EIF3D|EIF4B|RPL6|RPL10L|RPL11|RPL12|RPL24|RPS5|RPS10|RPS14|RPS17|RPS19|RPS27|RPS28|RPSA
